A practical protein-detecting array is desirable for its potential application in proteomics, medical diagnostics, and pathogen detection. Here, we report a novel protein-detecting array based on porphyrins containing peripheral amino acids as protein surface receptors. The array of porphyrin receptors showed a unique pattern of fluorescence change upon interaction with certain protein samples. Both metal and nonmetal-containing proteins and mixtures of proteins gave distinct patterns, allowing their unambiguous identification. The composite pattern for each sample was subjected to principal component analysis (PCA) to generate a clustering map for more practical visualization. Increasing the number of porphyrin receptors from eight to sixteen gave improved resolution, suggesting that this array is expandable to give satisfactory resolution for any given sample system by carefully maximizing the chemical diversity of the receptors.

Pattern recognition of proteins based on an array of functionalized porphyrins / Zhou, H; Baldini, Laura; Hong, J; Wilson, A. J.; Hamilton, A. D.. - In: JOURNAL OF THE AMERICAN CHEMICAL SOCIETY. - ISSN 0002-7863. - 128:(2006), pp. 2421-2425. [10.1021/ja056833c]

Pattern recognition of proteins based on an array of functionalized porphyrins.

BALDINI, Laura;
2006-01-01

Abstract

A practical protein-detecting array is desirable for its potential application in proteomics, medical diagnostics, and pathogen detection. Here, we report a novel protein-detecting array based on porphyrins containing peripheral amino acids as protein surface receptors. The array of porphyrin receptors showed a unique pattern of fluorescence change upon interaction with certain protein samples. Both metal and nonmetal-containing proteins and mixtures of proteins gave distinct patterns, allowing their unambiguous identification. The composite pattern for each sample was subjected to principal component analysis (PCA) to generate a clustering map for more practical visualization. Increasing the number of porphyrin receptors from eight to sixteen gave improved resolution, suggesting that this array is expandable to give satisfactory resolution for any given sample system by carefully maximizing the chemical diversity of the receptors.
2006
Pattern recognition of proteins based on an array of functionalized porphyrins / Zhou, H; Baldini, Laura; Hong, J; Wilson, A. J.; Hamilton, A. D.. - In: JOURNAL OF THE AMERICAN CHEMICAL SOCIETY. - ISSN 0002-7863. - 128:(2006), pp. 2421-2425. [10.1021/ja056833c]
File in questo prodotto:
File Dimensione Formato  
JACSarray full.pdf

non disponibili

Tipologia: Documento in Post-print
Licenza: Creative commons
Dimensione 215.32 kB
Formato Adobe PDF
215.32 kB Adobe PDF   Visualizza/Apri   Richiedi una copia

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11381/1508226
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus 213
  • ???jsp.display-item.citation.isi??? 204
social impact