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Utility of JC polyomavirus in tracing the pattern of human migrations dating to prehistoric times 1-gen-2005 Pavesi, Angelo
Origin and evolution of overlapping genes in Microviridae 1-gen-2005 Pavesi, Angelo; Conterio, F.
Origin and evolution of overlapping genes in Microviridae 1-gen-2006 Pavesi, Angelo
Pattern of nucleotide substitution in the overlapping nonstructural genes of influenza A virus and implication for the genetic diversity of the H5N1 subtype 1-gen-2007 Pavesi, Angelo
Comparative genomics of the genus Bifidobacterium 1-gen-2010 Bottacini, F.; Medini, D.; Pavesi, Angelo; Turroni, Francesca; Foroni, E.; Riley, D.; Giubellini, V.; Tettelin, H.; van Sinderen, D.; Ventura, Marco
AtL1 a Non-LTR Retrotrasposon Fragment in the Genome of Arabidopsis thaliana with Homology to Plants and Animals 1-gen-2013 Visioli, Giovanna; Maestri, Elena; Polverini, Eugenia; Pavesi, Angelo; Marmiroli, Nelson
Viral proteins originated de novo by overprinting can be identified by codon usage: application to the "gene nursery" of Deltaretroviruses. 1-gen-2013 Pavesi, Angelo; Magiorkinis, G; Karlin, Dg
Prediction of the determinants of thermal stability by linear discriminant analysis: the case of the glutamate dehydrogenase protein family. 1-gen-2014 Pavesi, Angelo
Different patterns of codon usage in the overlapping polymerase and surface genes of hepatitis B virus suggest a de novo origin by modular evolution 1-gen-2015 Pavesi, Angelo
Overlapping genes and the proteins they encode differ significantly in their sequence composition from non-overlapping genes 1-gen-2018 Pavesi, A.; Vianelli, A.; Chirico, N.; Bao, Y.; Blinkova, O.; Belshaw, R.; Firth, A.; Karlin, D.
Asymmetric evolution in viral overlapping genes is a source of selective protein adaptation 1-gen-2019 Pavesi, A.
New insights into the evolutionary features of viral overlapping genes by discriminant analysis 1-gen-2020 Pavesi, A.
Prediction of two novel overlapping ORFs in the genome of SARS-CoV-2 1-gen-2021 Pavesi, A.
Origin, evolution and stability of overlapping genes in viruses: A systematic review 1-gen-2021 Pavesi, A.
Conflicting and ambiguous names of overlapping ORFs in the SARS-CoV-2 genome: A homology-based resolution 1-gen-2021 Jungreis, I.; Nelson, C. W.; Ardern, Z.; Finkel, Y.; Krogan, N. J.; Sato, K.; Ziebuhr, J.; Stern-Ginossar, N.; Pavesi, A.; Firth, A. E.; Gorbalenya, A. E.; Kellis, M.
Extending the Coding Potential of Viral Genomes with Overlapping Antisense ORFs: A Case for the De Novo Creation of the Gene Encoding the Antisense Protein ASP of HIV-1 1-gen-2022 Pavesi, Angelo
Computational methods for inferring location and genealogy of overlapping genes in virus genomes: approaches and applications 1-gen-2022 Pavesi, A.
Different Patterns of Codon Usage and Amino Acid Composition across Primate Lentiviruses 1-gen-2023 Pavesi, Angelo; Romerio, Fabio
Functional characterization of archaic-specific variants in mitonuclear genes: insights from comparative analysis in S. cerevisiae 1-gen-2024 Aneli, S; Ceccatelli Berti, C; Gilea, Ai; Birolo, G; Mutti, G; Pavesi, A; Baruffini, E; Goffrini, P; Capelli, C
Creation of the HIV-1 antisense gene asp coincided with the emergence of the pandemic group M and is associated with faster disease progression 1-gen-2024 Pavesi, Angelo; Romerio, Fabio
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